LCDB workflows

LCDB workflows is a collection of snakemake workflows combined with supporting infrastructure to support best-practices, reproducible, highly parallel processing of high-throughput sequencing data on a high-performance computing cluster.

Contents:

• First-time setup
• Subsequent setup
• Testing
• Configuration
• Mapping workflow
• Mapping workflow
• References
• Building documentation

Indices and tables

• Index
• Module Index
• Search Page